The CDC Office of Advanced Molecular Detection (AMD) recently released the COVID-19 Genomic Epidemiology Toolkit to help epidemiologists apply genomic data to state and local investigations and track SARS-CoV-2 strains circulating in their jurisdictions. The toolkit consists of modular video presentations, audio transcripts, case studies, scientific narratives, examples/templates, job aids, reference documents, external links, etc. The first phase of the toolkit includes three modules that introduce genomic epidemiology, with specific reference to the genome of SARS-CoV-2.
You can also sign up to receive email updates when new modules are added to the COVID-19 Genomic Epidemiology Toolkit.